RNA-related tools on the Bielefeld Bioinformatics Server

Sczyrba A, Krüger J, Mersch H, Kurtz S, Giegerich R (2003)
Nucleic Acids Research 31(13): 3767-3770.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
OA
OA 3767.pdf
Autor*in
Abstract / Bemerkung
We present four tools for the analysis of RNA secondary structure. They provide animated visualization of multiple structures, prediction of potential conformational switching, structure comparison (including local structure alignment) and prediction of structures potentially containing a certain kind of pseudoknots. All are available via the Bielefeld University Bioinformatics Server (http://bibiserv.techfak.uni-bielefeld.de).
Erscheinungsjahr
2003
Zeitschriftentitel
Nucleic Acids Research
Band
31
Ausgabe
13
Seite(n)
3767-3770
ISSN
0021-9193
eISSN
1362-4962
Page URI
https://pub.uni-bielefeld.de/record/1773844

Zitieren

Sczyrba A, Krüger J, Mersch H, Kurtz S, Giegerich R. RNA-related tools on the Bielefeld Bioinformatics Server. Nucleic Acids Research. 2003;31(13):3767-3770.
Sczyrba, A., Krüger, J., Mersch, H., Kurtz, S., & Giegerich, R. (2003). RNA-related tools on the Bielefeld Bioinformatics Server. Nucleic Acids Research, 31(13), 3767-3770. https://doi.org/10.1093/nar/gkg576
Sczyrba, Alexander, Krüger, Jan, Mersch, Henning, Kurtz, Stefan, and Giegerich, Robert. 2003. “RNA-related tools on the Bielefeld Bioinformatics Server”. Nucleic Acids Research 31 (13): 3767-3770.
Sczyrba, A., Krüger, J., Mersch, H., Kurtz, S., and Giegerich, R. (2003). RNA-related tools on the Bielefeld Bioinformatics Server. Nucleic Acids Research 31, 3767-3770.
Sczyrba, A., et al., 2003. RNA-related tools on the Bielefeld Bioinformatics Server. Nucleic Acids Research, 31(13), p 3767-3770.
A. Sczyrba, et al., “RNA-related tools on the Bielefeld Bioinformatics Server”, Nucleic Acids Research, vol. 31, 2003, pp. 3767-3770.
Sczyrba, A., Krüger, J., Mersch, H., Kurtz, S., Giegerich, R.: RNA-related tools on the Bielefeld Bioinformatics Server. Nucleic Acids Research. 31, 3767-3770 (2003).
Sczyrba, Alexander, Krüger, Jan, Mersch, Henning, Kurtz, Stefan, and Giegerich, Robert. “RNA-related tools on the Bielefeld Bioinformatics Server”. Nucleic Acids Research 31.13 (2003): 3767-3770.
Alle Dateien verfügbar unter der/den folgenden Lizenz(en):
Copyright Statement:
Dieses Objekt ist durch das Urheberrecht und/oder verwandte Schutzrechte geschützt. [...]
Volltext(e)
Access Level
OA Open Access
Zuletzt Hochgeladen
2019-09-06T08:48:09Z
MD5 Prüfsumme
87bdf5918bb2d820b668c8206b0e7bed
Access Level
OA Open Access
Zuletzt Hochgeladen
2019-09-06T08:48:09Z
MD5 Prüfsumme
7eee5cbe16e9d1f8842075b6a4b65498


11 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Next Generation Sequencing for Long Non-coding RNAs Profile for CD4+ T Cells in the Mouse Model of Acute Asthma.
Wang Z, Ji N, Chen Z, Wu C, Sun Z, Yu W, Hu F, Huang M, Zhang M., Front Genet 10(), 2019
PMID: 31231429
Mechanistic Roles of Noncoding RNAs in Lung Cancer Biology and Their Clinical Implications.
Enfield KS, Pikor LA, Martinez VD, Lam WL., Genet Res Int 2012(), 2012
PMID: 22852089
ViennaRNA Package 2.0.
Lorenz R, Bernhart SH, Höner Zu Siederdissen C, Tafer H, Flamm C, Stadler PF, Hofacker IL., Algorithms Mol Biol 6(), 2011
PMID: 22115189
Computational methods in noncoding RNA research.
Machado-Lima A, del Portillo HA, Durham AM., J Math Biol 56(1-2), 2008
PMID: 17786447
A score matrix to reveal the hidden links in glycans.
Aoki KF, Mamitsuka H, Akutsu T, Kanehisa M., Bioinformatics 21(8), 2005
PMID: 15585530
A benchmark of multiple sequence alignment programs upon structural RNAs.
Gardner PP, Wilm A, Washietl S., Nucleic Acids Res 33(8), 2005
PMID: 15860779
RNA regulation: a new genetics?
Mattick JS., Nat Rev Genet 5(4), 2004
PMID: 15131654
RDfolder: a web server for prediction of RNA secondary structure.
Ying X, Luo H, Luo J, Li W., Nucleic Acids Res 32(web server issue), 2004
PMID: 15215369
A comprehensive comparison of comparative RNA structure prediction approaches.
Gardner PP, Giegerich R., BMC Bioinformatics 5(), 2004
PMID: 15458580

6 References

Daten bereitgestellt von Europe PubMed Central.


AUTHOR UNKNOWN, 0

AUTHOR UNKNOWN, 0
RNA movies: visualizing RNA secondary structure spaces.
Evers D, Giegerich R., Bioinformatics 15(1), 1999
PMID: 10068690

AUTHOR UNKNOWN, 0
Molecular dissection of the pseudoknot governing the translational regulation of Escherichia coli ribosomal protein S15.
Philippe C, Benard L, Portier C, Westhof E, Ehresmann B, Ehresmann C., Nucleic Acids Res. 23(1), 1995
PMID: 7532857
Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 12824414
PubMed | Europe PMC

Suchen in

Google Scholar