Genotyping by sequencing reveals contrasting patterns of population structure, ecologically mediated divergence, and long-distance dispersal in North American palms

Klimova A, Ortega-Rubio A, Vendrami D, Hoffman J (2018)
Ecology and Evolution 8(11): 5873-5890.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
OA 1.43 MB
DOI
URN
urn:nbn:de:0070-pub-29201060
Autor*in
Klimova, Anastasia; Ortega-Rubio, Alfredo; Vendrami, DavidUniBi; Hoffman, JosephUniBi
Einrichtung
Fakultät für Biologie > Verhaltensforschung
Abstract / Bemerkung
Comparative studies can provide powerful insights into processes that affect population divergence and thereby help to elucidate the mechanisms by which contemporary populations may respond to environmental change. Furthermore, approaches such as genotyping by sequencing (GBS) provide unprecedented power for resolving genetic differences among species and populations. We therefore used GBS to provide a genomewide perspective on the comparative population structure of two palm genera, Washingtonia and Brahea, on the Baja California peninsula, a region of high landscape and ecological complexity. First, we used phylogenetic analysis to address taxonomic uncertainties among five currently recognized species. We resolved three main clades, the first corresponding to W. robusta and W. filifera, the second to B. brandegeei and B. armata, and the third to B. edulis from Guadalupe Island. Focusing on the first two clades, we then delved deeper by investigating the underlying population structure. Striking differences were found, with GBS uncovering four distinct Washingtonia populations and identifying a suite of loci associated with temperature, consistent with ecologically mediated divergence. By contrast, individual mountain ranges could be resolved in Brahea and few loci were associated with environmental variables, implying a more prominent role of neutral divergence. Finally, evidence was found for long‐distance dispersal events in Washingtonia but not Brahea, in line with knowledge of the dispersal mechanisms of these palms including the possibility of human‐mediated dispersal. Overall, our study demonstrates the power of GBS together with a comparative approach to elucidate markedly different patterns of genomewide divergence mediated by multiple effectors.
Erscheinungsjahr
2018
Zeitschriftentitel
Ecology and Evolution
Band
8
Ausgabe
11
Seite(n)
5873-5890
Urheberrecht / Lizenzen
Creative Commons Namensnennung 4.0 International Public License (CC-BY 4.0)
ISSN
2045-7758
Page URI
https://pub.uni-bielefeld.de/record/2920106

Zitieren

Klimova A, Ortega-Rubio A, Vendrami D, Hoffman J. Genotyping by sequencing reveals contrasting patterns of population structure, ecologically mediated divergence, and long-distance dispersal in North American palms. Ecology and Evolution. 2018;8(11):5873-5890.
Klimova, A., Ortega-Rubio, A., Vendrami, D., & Hoffman, J. (2018). Genotyping by sequencing reveals contrasting patterns of population structure, ecologically mediated divergence, and long-distance dispersal in North American palms. Ecology and Evolution, 8(11), 5873-5890. doi:10.1002/ece3.4125
Klimova, Anastasia, Ortega-Rubio, Alfredo, Vendrami, David, and Hoffman, Joseph. 2018. “Genotyping by sequencing reveals contrasting patterns of population structure, ecologically mediated divergence, and long-distance dispersal in North American palms”. Ecology and Evolution 8 (11): 5873-5890.
Klimova, A., Ortega-Rubio, A., Vendrami, D., and Hoffman, J. (2018). Genotyping by sequencing reveals contrasting patterns of population structure, ecologically mediated divergence, and long-distance dispersal in North American palms. Ecology and Evolution 8, 5873-5890.
Klimova, A., et al., 2018. Genotyping by sequencing reveals contrasting patterns of population structure, ecologically mediated divergence, and long-distance dispersal in North American palms. Ecology and Evolution, 8(11), p 5873-5890.
A. Klimova, et al., “Genotyping by sequencing reveals contrasting patterns of population structure, ecologically mediated divergence, and long-distance dispersal in North American palms”, Ecology and Evolution, vol. 8, 2018, pp. 5873-5890.
Klimova, A., Ortega-Rubio, A., Vendrami, D., Hoffman, J.: Genotyping by sequencing reveals contrasting patterns of population structure, ecologically mediated divergence, and long-distance dispersal in North American palms. Ecology and Evolution. 8, 5873-5890 (2018).
Klimova, Anastasia, Ortega-Rubio, Alfredo, Vendrami, David, and Hoffman, Joseph. “Genotyping by sequencing reveals contrasting patterns of population structure, ecologically mediated divergence, and long-distance dispersal in North American palms”. Ecology and Evolution 8.11 (2018): 5873-5890.
Alle Dateien verfügbar unter der/den folgenden Lizenz(en):
Creative Commons Namensnennung 4.0 International Public License (CC-BY 4.0):
cc_by_4_0
https://creativecommons.org/licenses/by/4.0/deed.de
https://creativecommons.org/licenses/by/4.0/legalcode.de
Volltext(e)
Name
1.43 MB
Access Level
OA Open Access
Zuletzt Hochgeladen
2019-09-25T06:51:43Z
MD5 Prüfsumme
cea107dcd82bc7bf6953a2552d91c952


1 Zitation in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

RAD sequencing sheds new light on the genetic structure and local adaptation of European scallops and resolves their demographic histories.
Vendrami DLJ, De Noia M, Telesca L, Handal W, Charrier G, Boudry P, Eberhart-Phillips L, Hoffman JI., Sci Rep 9(1), 2019
PMID: 31092869

136 References

Daten bereitgestellt von Europe PubMed Central.

Speciation on oceanic islands: rapid adaptive divergence vs. cryptic speciation in a Guadalupe Island songbird (Aves: Junco).
Aleixandre P, Hernandez Montoya J, Mila B., PLoS ONE 8(5), 2013
PMID: 23675466
Evolutionary genetics of plant adaptation.
Anderson JT, Willis JH, Mitchell-Olds T., Trends Genet. 27(7), 2011
PMID: 21550682
Harnessing the power of RADseq for ecological and evolutionary genomics
AUTHOR UNKNOWN, 2016
The introduction of the date palm to Baja California
AUTHOR UNKNOWN, 1957

AUTHOR UNKNOWN, 2000
In the light of evolution X: Comparative phylogeography.
Avise JC, Bowen BW, Ayala FJ., Proc. Natl. Acad. Sci. U.S.A. 113(29), 2016
PMID: 27432955
Evolution of the Madro‐Tertiary geoflora
AUTHOR UNKNOWN, 1958
Miocene dispersal drives island radiations in the palm tribe Trachycarpeae (Arecaceae).
Bacon CD, Baker WJ, Simmons MP., Syst. Biol. 61(3), 2012
PMID: 22223444
Species limits, geographical distribution and genetic diversity in Johannesteijsmannia (Arecaceae)
AUTHOR UNKNOWN, 2016
Global biogeography and diversification of palms sheds light on the evolution of tropical lineages. Historical biogeography
AUTHOR UNKNOWN, 2013
Petrology and chemistry of Guadalupe Island: An alkalic seamount on a fossil ridge crest
AUTHOR UNKNOWN, 1977
Ecological speciation in the tropics: Insights from comparative genetic studies in Amazonia
AUTHOR UNKNOWN, 2015
Seascape genomics provides evidence for thermal adaptation and current-mediated population structure in American lobster (Homarus americanus).
Benestan L, Quinn BK, Maaroufi H, Laporte M, Clark FK, Greenwood SJ, Rochette R, Bernatchez L., Mol. Ecol. 25(20), 2016
PMID: 27543860
Controlling the false discovery rate: A practical and powerful approach to multiple testing
AUTHOR UNKNOWN, 1995
Genetic isolation and evolutionary history of oases populations of the Baja California killifish, Fundulus lima
AUTHOR UNKNOWN, 2007
DensiTree: making sense of sets of phylogenetic trees.
Bouckaert RR., Bioinformatics 26(10), 2010
PMID: 20228129
BEAST 2: a software platform for Bayesian evolutionary analysis.
Bouckaert R, Heled J, Kuhnert D, Vaughan T, Wu CH, Xie D, Suchard MA, Rambaut A, Drummond AJ., PLoS Comput. Biol. 10(4), 2014
PMID: 24722319
TASSEL: software for association mapping of complex traits in diverse samples.
Bradbury PJ, Zhang Z, Kroon DE, Casstevens TM, Ramdoss Y, Buckler ES., Bioinformatics 23(19), 2007
PMID: 17586829
Inferring species trees directly from biallelic genetic markers: bypassing gene trees in a full coalescent analysis.
Bryant D, Bouckaert R, Felsenstein J, Rosenberg NA, RoyChoudhury A., Mol. Biol. Evol. 29(8), 2012
PMID: 22422763
Neighbor-net: an agglomerative method for the construction of phylogenetic networks.
Bryant D, Moulton V., Mol. Biol. Evol. 21(2), 2003
PMID: 14660700
Second-generation PLINK: rising to the challenge of larger and richer datasets.
Chang CC, Chow CC, Tellier LC, Vattikuti S, Purcell SM, Lee JJ., Gigascience 4(), 2015
PMID: 25722852
Reading the fan palms
AUTHOR UNKNOWN, 1985
Nutritional value of desert fan palm fruits
AUTHOR UNKNOWN, 1985
Three palm species at Cataviña
AUTHOR UNKNOWN, 1987

AUTHOR UNKNOWN, 2008
The largest desert fan palm oases
AUTHOR UNKNOWN, 1986
Tropical rain forest evolution: palms as a model group.
Couvreur TL, Baker WJ., BMC Biol. 11(), 2013
PMID: 23587415
Origin and global diversification patterns of tropical rain forests: inferences from a complete genus-level phylogeny of palms.
Couvreur TL, Forest F, Baker WJ., BMC Biol. 9(), 2011
PMID: 21679405
The variant call format and VCFtools.
, Bioinformatics 27(15), 2011
PMID: 21653522
Genotyping-by-sequencing (GBS): a novel, efficient and cost-effective genotyping method for cattle using next-generation sequencing.
De Donato M, Peters SO, Mitchell SE, Hussain T, Imumorin IG., PLoS ONE 8(5), 2013
PMID: 23690931
Assessing the geological and climatic forcing of biodiversity and evolution surrounding the Gulf of California
AUTHOR UNKNOWN, 2015

AUTHOR UNKNOWN, 2008
Geographical ecology of the palms (Arecaceae): determinants of diversity and distributions across spatial scales.
Eiserhardt WL, Svenning JC, Kissling WD, Balslev H., Ann. Bot. 108(8), 2011
PMID: 21712297
A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species.
Elshire RJ, Glaubitz JC, Sun Q, Poland JA, Kawamoto K, Buckler ES, Mitchell SE., PLoS ONE 6(5), 2011
PMID: 21573248

AUTHOR UNKNOWN, 2016

AUTHOR UNKNOWN, 2007

AUTHOR UNKNOWN, 2001
The palms (Arecaceae) of Sonora, Mexico
AUTHOR UNKNOWN, 1999

AUTHOR UNKNOWN, 1985
Identification of outlier sinagenomic scan for selection along environmental gradients in the bamboo locust, Ceracris kiangsu
AUTHOR UNKNOWN, 2016
Estimating genomic diversity and population differentiation - an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri.
Fischer MC, Rellstab C, Leuzinger M, Roumet M, Gugerli F, Shimizu KK, Holderegger R, Widmer A., BMC Genomics 18(1), 2017
PMID: 28077077
Water relations and community composition in three blue fan palm oases across the Californian‐Sonoran biome transition
AUTHOR UNKNOWN, 2007

AUTHOR UNKNOWN, 2002
LEA: An R package for landscape and ecological association studies
AUTHOR UNKNOWN, 2015
Fast and efficient estimation of individual ancestry coefficients.
Frichot E, Mathieu F, Trouillon T, Bouchard G, Francois O., Genetics 196(4), 2014
PMID: 24496008
Testing for associations between loci and environmental gradients using latent factor mixed models.
Frichot E, Schoville SD, Bouchard G, Francois O., Mol. Biol. Evol. 30(7), 2013
PMID: 23543094
Adaptive divergence despite strong genetic drift: genomic analysis of the evolutionary mechanisms causing genetic differentiation in the island fox (Urocyon littoralis).
Funk WC, Lovich RE, Hohenlohe PA, Hofman CA, Morrison SA, Sillett TS, Ghalambor CK, Maldonado JE, Rick TC, Day MD, Polato NR, Fitzpatrick SW, Coonan TJ, Crooks KR, Dillon A, Garcelon DK, King JL, Boser CL, Gould N, Andelt WF., Mol. Ecol. 25(10), 2016
PMID: 26992010

AUTHOR UNKNOWN, 2017
The Brahea edulis palm forest in Guadalupe Island: A North American fog oasis?
AUTHOR UNKNOWN, 2012
Fine-scale phylogeographic congruence despite demographic incongruence in two low-mobility saproxylic springtails.
Garrick RC, Rowell DM, Simmons CS, Hillis DM, Sunnucks P., Evolution 62(5), 2008
PMID: 18298648
TASSEL-GBS: a high capacity genotyping by sequencing analysis pipeline.
Glaubitz JC, Casstevens TM, Lu F, Harriman J, Elshire RJ, Sun Q, Buckler ES., PLoS ONE 9(2), 2014
PMID: 24587335
Evolutionary biogeography on Mexico's Baja California peninsula: A synthesis of molecules and historical geology
AUTHOR UNKNOWN, 2000
The oases of Central Baja California, Mexico. Part I. A preliminary account of the relict mesherpetofauna and the status of the oases
AUTHOR UNKNOWN, 1993
A re‐evaluation of the evidence for a Mid‐Pleistocene seaway in Baja California: A reply to Riddle et al
AUTHOR UNKNOWN, 2002

AUTHOR UNKNOWN, 2011
Climate relicts: Past, present, future
AUTHOR UNKNOWN, 2011
A summary of fossil records for Arecaceae
AUTHOR UNKNOWN, 2006
Taxon sampling and the accuracy of phylogenetic analyses
AUTHOR UNKNOWN, 2008

AUTHOR UNKNOWN, 1995
Phylogeography's past, present, and future: 10 years after Avise, 2000.
Hickerson MJ, Carstens BC, Cavender-Bares J, Crandall KA, Graham CH, Johnson JB, Rissler L, Victoriano PF, Yoder AD., Mol. Phylogenet. Evol. 54(1), 2009
PMID: 19755165
Very high resolution interpolated climate surfaces for global land areas
AUTHOR UNKNOWN, 2005
Finding the genomic basis of local adaptation: Pitfalls, practical solutions, and future directions
AUTHOR UNKNOWN, 2016
Washingtonia filibusta (Arecaceae: Coryphoideae), a new hybrid from cultivation
AUTHOR UNKNOWN, 2014
Effects of brooding and broadcasting reproductive modes on the population genetic structure of two Antarctic gastropod molluscs
AUTHOR UNKNOWN, 2011
High-throughput sequencing reveals inbreeding depression in a natural population.
Hoffman JI, Simpson F, David P, Rijks JM, Kuiken T, Thorne MA, Lacy RC, Dasmahapatra KK., Proc. Natl. Acad. Sci. U.S.A. 111(10), 2014
PMID: 24586051
Application of phylogenetic networks in evolutionary studies.
Huson DH, Bryant D., Mol. Biol. Evol. 23(2), 2005
PMID: 16221896
CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure.
Jakobsson M, Rosenberg NA., Bioinformatics 23(14), 2007
PMID: 17485429
Isolation by distance, web service.
Jensen JL, Bohonak AJ, Kelley ST., BMC Genet. 6(), 2005
PMID: 15760479
A spatial analysis method (SAM) to detect candidate loci for selection: towards a landscape genomics approach to adaptation.
Joost S, Bonin A, Bruford MW, Despres L, Conord C, Erhardt G, Taberlet P., Mol. Ecol. 16(18), 2007
PMID: 17850556
Analysis of microsatellite variation in Pinus radiata reveals effects of genetic drift but no recent bottlenecks
AUTHOR UNKNOWN, 2006
Population genomic signatures of divergent adaptation, gene flow and hybrid speciation in the rapid radiation of Lake Victoria cichlid fishes.
Keller I, Wagner CE, Greuter L, Mwaiko S, Selz OM, Sivasundar A, Wittwer S, Seehausen O., Mol. Ecol. 22(11), 2012
PMID: 23121191
Cenozoic imprints on the phylogenetic structure of palm species assemblages worldwide.
Kissling WD, Eiserhardt WL, Baker WJ, Borchsenius F, Couvreur TL, Balslev H, Svenning JC., Proc. Natl. Acad. Sci. U.S.A. 109(19), 2012
PMID: 22529387
Molecular genetic analysis of two native desert palm genera, Washingtonia and Brahea, from the Baja California Peninsula and Guadalupe Island.
Klimova A, Hoffman JI, Gutierrez-Rivera JN, Leon de la Luz J, Ortega-Rubio A., Ecol Evol 7(13), 2017
PMID: 28690819
Not an ancient relic: the endemic Livistona palms of arid central Australia could have been introduced by humans.
Kondo T, Crisp MD, Linde C, Bowman DM, Kawamura K, Kaneko S, Isagi Y., Proc. Biol. Sci. 279(1738), 2012
PMID: 22398168

AUTHOR UNKNOWN, 2014
On the urgency of conservation of Guadalupe Island, Mexico: Is it a lost paradise?
AUTHOR UNKNOWN, 2003
Persistent effects of pre-Columbian plant domestication on Amazonian forest composition.
Levis C, Costa FR, Bongers F, Pena-Claros M, Clement CR, Junqueira AB, Neves EG, Tamanaha EK, Figueiredo FO, Salomao RP, Castilho CV, Magnusson WE, Phillips OL, Guevara JE, Sabatier D, Molino JF, Lopez DC, Mendoza AM, Pitman NC, Duque A, Vargas PN, Zartman CE, Vasquez R, Andrade A, Camargo JL, Feldpausch TR, Laurance SG, Laurance WF, Killeen TJ, Nascimento HE, Montero JC, Mostacedo B, Amaral IL, Guimaraes Vieira IC, Brienen R, Castellanos H, Terborgh J, Carim MJ, Guimaraes JR, Coelho LS, Matos FD, Wittmann F, Mogollon HF, Damasco G, Davila N, Garcia-Villacorta R, Coronado EN, Emilio T, Filho DA, Schietti J, Souza P, Targhetta N, Comiskey JA, Marimon BS, Marimon BH Jr, Neill D, Alonso A, Arroyo L, Carvalho FA, de Souza FC, Dallmeier F, Pansonato MP, Duivenvoorden JF, Fine PV, Stevenson PR, Araujo-Murakami A, Aymard C GA, Baraloto C, do Amaral DD, Engel J, Henkel TW, Maas P, Petronelli P, Revilla JD, Stropp J, Daly D, Gribel R, Paredes MR, Silveira M, Thomas-Caesar R, Baker TR, da Silva NF, Ferreira LV, Peres CA, Silman MR, Ceron C, Valverde FC, Di Fiore A, Jimenez EM, Mora MC, Toledo M, Barbosa EM, Bonates LC, Arboleda NC, Farias ES, Fuentes A, Guillaumet JL, Jorgensen PM, Malhi Y, de Andrade Miranda IP, Phillips JF, Prieto A, Rudas A, Ruschel AR, Silva N, von Hildebrand P, Vos VA, Zent EL, Zent S, Cintra BB, Nascimento MT, Oliveira AA, Ramirez-Angulo H, Ramos JF, Rivas G, Schongart J, Sierra R, Tirado M, van der Heijden G, Torre EV, Wang O, Young KR, Baider C, Cano A, Farfan-Rios W, Ferreira C, Hoffman B, Mendoza C, Mesones I, Torres-Lezama A, Medina MN, van Andel TR, Villarroel D, Zagt R, Alexiades MN, Balslev H, Garcia-Cabrera K, Gonzales T, Hernandez L, Huamantupa-Chuquimaco I, Manzatto AG, Milliken W, Cuenca WP, Pansini S, Pauletto D, Arevalo FR, Reis NF, Sampaio AF, Giraldo LE, Sandoval EH, Gamarra LV, Vela CI, Ter Steege H., Science 355(6328), 2017
PMID: 28254935
Genomics of the divergence continuum in an African plant biodiversity hotspot, I: drivers of population divergence in Restio capensis (Restionaceae).
Lexer C, Wuest RO, Mangili S, Heuertz M, Stolting KN, Pearman PB, Forest F, Salamin N, Zimmermann NE, Bossolini E., Mol. Ecol. 23(17), 2014
PMID: 25065899
Fast and accurate short read alignment with Burrows-Wheeler transform.
Li H, Durbin R., Bioinformatics 25(14), 2009
PMID: 19451168
Deep genealogies and the mid‐peninsular seaway of Baja California
AUTHOR UNKNOWN, 2006
Propagation methods for Washingtonia filifera (Linden ex André) H. Wendl. (Arecaceae)
AUTHOR UNKNOWN, 2012

AUTHOR UNKNOWN, 2014
Relative contributions of neutral and non-neutral genetic differentiation to inform conservation of steelhead trout across highly variable landscapes.
Matala AP, Ackerman MW, Campbell MR, Narum SR., Evol Appl 7(6), 2014
PMID: 25067950
LOW GENIC DIFFERENTIATION AMONG ISOLATED POPULATIONS OF THE CALIFORNIA FAN PALM (WASHINGTONIA FILIFERA).
McClenaghan LR Jr, Beauchamp AC., Evolution 40(2), 1986
PMID: 28556029
The Washington fan palm
AUTHOR UNKNOWN, 1978
The trouble with isolation by distance.
Meirmans PG., Mol. Ecol. 21(12), 2012
PMID: 22574758
GENOTYPE and GENODIVE two programs for the analysis of genetic diversity of asexual organisms
AUTHOR UNKNOWN, 2004
Surviving in mountain climate refugia: new insights from the genetic diversity and structure of the relict shrub Myrtus nivellei (Myrtaceae) in the Sahara Desert.
Migliore J, Baumel A, Juin M, Fady B, Roig A, Duong N, Medail F., PLoS ONE 8(9), 2013
PMID: 24058489
Distribution and regional ecology of Californian palm oases interpreted from Google Earth images
AUTHOR UNKNOWN, 2011
INFERRING PHYLOGENIES FROM mtDNA VARIATION: MITOCHONDRIAL-GENE TREES VERSUS NUCLEAR-GENE TREES.
Moore WS., Evolution 49(4), 1995
PMID: 28565131

AUTHOR UNKNOWN, 1996
Applications of SNPs in ecology, evolution, and conservation
AUTHOR UNKNOWN, 2004
Quaternary rift‐flank uplift of the peninsular ranges in baja and southern California by removal of mantle lithosphere
AUTHOR UNKNOWN, 2009
The challenge of separating signatures of local adaptation from those of isolation by distance and colonization history: The case of two white pines.
Nadeau S, Meirmans PG, Aitken SN, Ritland K, Isabel N., Ecol Evol 6(24), 2016
PMID: 28035257
Genotyping-by-sequencing in ecological and conservation genomics.
Narum SR, Buerkle CA, Davey JW, Miller MR, Hohenlohe PA., Mol. Ecol. 22(11), 2013
PMID: 23711105

AUTHOR UNKNOWN, 2005
vegan: Community ecology package
AUTHOR UNKNOWN, 2013
Evolution in subdivided plant populations: concepts, recent advances and future directions.
Pannell JR, Fields PD., New Phytol. 201(2), 2013
PMID: 24111698
Toward a paradigm shift in comparative phylogeography driven by trait-based hypotheses.
Papadopoulou A, Knowles LL., Proc. Natl. Acad. Sci. U.S.A. 113(29), 2016
PMID: 27432974
Ancient admixture in human history.
Patterson N, Moorjani P, Luo Y, Mallick S, Rohland N, Zhan Y, Genschoreck T, Webster T, Reich D., Genetics 192(3), 2012
PMID: 22960212
StAMPP: an R package for calculation of genetic differentiation and structure of mixed-ploidy level populations.
Pembleton LW, Cogan NO, Forster JW., Mol Ecol Resour 13(5), 2013
PMID: 23738873
Inference of population splits and mixtures from genome-wide allele frequency data.
Pickrell JK, Pritchard JK., PLoS Genet. 8(11), 2012
PMID: 23166502
A novel and fast approach for population structure inference using kernel-PCA and optimization.
Popescu AA, Harper AL, Trick M, Bancroft I, Huber KT., Genetics 198(4), 2014
PMID: 25326237
Inference of population structure using multilocus genotype data.
Pritchard JK, Stephens M, Donnelly P., Genetics 155(2), 2000
PMID: 10835412
Isolation by distance and isolation by environment contribute to population differentiation in Protea repens (Proteaceae L.), a widespread South African species
AUTHOR UNKNOWN, 2017
Current status of Mexican palms
AUTHOR UNKNOWN, 1992
Adaptive and non-adaptive divergence in a common landscape.
Raeymaekers JAM, Chaturvedi A, Hablutzel PI, Verdonck I, Hellemans B, Maes GE, De Meester L, Volckaert FAM., Nat Commun 8(1), 2017
PMID: 28814718
Tracer 1.6
AUTHOR UNKNOWN, 2014
Cryptic vicariance in the historical assembly of a Baja California peninsular desert biota.
Riddle BR, Hafner DJ, Alexander LF, Jaeger JR., Proc. Natl. Acad. Sci. U.S.A. 97(26), 2000
PMID: 11095731
Endemic regions of the vascular flora of the peninsula of Baja California, Mexico
AUTHOR UNKNOWN, 2007
Historical evidence of the Spanish introduction of date palm (Phoenix dactylifera L., Arecaceae) into the Americas
Rivera D, Johnson D, Delgadillo J, Carrillo MH, Obon C, Krueger R, Alcaraz F, Rios S, Carreno E., Genet. Resour. Crop Evol. 60(4), 2013
PMID: IND500659905
More genes or more taxa? The relative contribution of gene number and taxon number to phylogenetic accuracy.
Rokas A, Carroll SB., Mol. Biol. Evol. 22(5), 2005
PMID: 15746014
Can phylogenetic signal, character displacement, or random phenotypic drift explain the morphological variation in the genus Geonoma (Arecaceae)?
AUTHOR UNKNOWN, 2012
Ecological speciation
AUTHOR UNKNOWN, 2005
Sympatric speciation in palms on an oceanic island.
Savolainen V, Anstett MC, Lexer C, Hutton I, Clarkson JJ, Norup MV, Powell MP, Springate D, Salamin N, Baker WJ., Nature 441(7090), 2006
PMID: 16467788
Ecological genomics of local adaptation
AUTHOR UNKNOWN, 2013

AUTHOR UNKNOWN, 2000
Bioinformatic processing of RAD‐seq data dramatically impacts downstream population genetic inference
AUTHOR UNKNOWN, 2017
Widespread evidence for incipient ecological speciation: a meta-analysis of isolation-by-ecology.
Shafer AB, Wolf JB., Ecol. Lett. 16(7), 2013
PMID: 23627762
Germination of native and exotic plant seeds dispersed by coyotes (Canis latrans) in Southern California
AUTHOR UNKNOWN, 2005
Evolutionary lessons from California plant phylogeography.
Sork VL, Gugger PF, Chen JM, Werth S., Proc. Natl. Acad. Sci. U.S.A. 113(29), 2016
PMID: 27432984
The advantages of going large: genome-wide SNPs clarify the complex population history and systematics of the threatened western pond turtle.
Spinks PQ, Thomson RC, Shaffer HB., Mol. Ecol. 23(9), 2014
PMID: 24673803
High performance computation of landscape genomic models including local indices of spatial association
AUTHOR UNKNOWN, 2016
The uniqueness of palms
AUTHOR UNKNOWN, 2006
A family portrait: unravelling the complexities of palms.
Tregear JW, Rival A, Pintaud JC., Ann. Bot. 108(8), 2011
PMID: 22200064
RAD sequencing resolves fine-scale population structure in a benthic invertebrate: implications for understanding phenotypic plasticity.
Vendrami DL, Telesca L, Weigand H, Weiss M, Fawcett K, Lehman K, Clark MS, Leese F, McMinn C, Moore H, Hoffman JI., R Soc Open Sci 4(2), 2017
PMID: 28386419
XIV Simposio de Binacional de Botánica Baja California y Áreas Adyacentes
AUTHOR UNKNOWN, 2017
Isolation by environment.
Wang IJ, Bradburd GS., Mol. Ecol. 23(23), 2014
PMID: 25256562

AUTHOR UNKNOWN, 2014
Patterns of frugivory, seed dispersal and predation of blue fan palms (Brahea armata) in oases of northern Baja California
Wehncke EV, Medellin XL, Ezcurra E., J. Arid Environ. 73(9), 2009
PMID: IND44229216
Blue fan palm distribution and seed removal patterns in three desert oases of northern Baja California, Mexico
AUTHOR UNKNOWN, 2010

AUTHOR UNKNOWN, 1980
Criteria for selecting microhaplotypes: mixture detection and deconvolution.
Kidd KK, Speed WC., Investig Genet 6(), 2015
PMID: 25750707
Climate relicts and their associated communities as natural ecology and evolution laboratories.
Woolbright SA, Whitham TG, Gehring CA, Allan GJ, Bailey JK., Trends Ecol. Evol. (Amst.) 29(7), 2014
PMID: 24932850
Isolation by Distance.
Wright S., Genetics 28(2), 1943
PMID: 17247074
Climate change mitigation: A spatial analysis of global land suitability for clean development mechanism afforestation and reforestation
Zomer RobertJ, Trabucco Antonio, Bossio DeborahA, Verchot LouisV., Agriculture, ecosystems and environment. 126(1-2), 2008
PMID: IND44040724
Material in PUB:
Teil dieser Dissertation
Application of cutting-edge genomic approaches to address key questions in ecology and evolution. Bringing molecular ecology to the genomic era
Vendrami D (2018)
Bielefeld: Universität Bielefeld.
Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 29938100
PubMed | Europe PMC

Suchen in

Google Scholar