Visualizing Related Metabolic Pathways in Two and a Half Dimensions

Brandes, Ulrik; Dwyer, Tim; Schreiber, Falk

Visualizing Related Metabolic Pathways in Two and a Half Dimensions

Dateien

bds_vrmpt_04.pdfGröße: 456.35 KBDownloads: 839

Datum

2004

Autor:innen

Brandes, Ulrik

Dwyer, Tim

Schreiber, Falk

Open Access-Veröffentlichung

Open Access Green

Sammlungen

Informatik und Informationswissenschaft

Publikationstyp

Beitrag zu einem Konferenzband

Publikationsstatus

Published

Erschienen in

LIOTTA, Giuseppe, ed.. Graph Drawing. Berlin, Heidelberg: Springer Berlin Heidelberg, 2004, pp. 111-122. Lecture Notes in Computer Science. 2912. ISBN 978-3-540-20831-0. Available under: doi: 10.1007/978-3-540-24595-7_10

Zusammenfassung

We propose a method for visualizing a set of related metabolic pathways using 2 1/2D graph drawing. Interdependent, twodimensional layouts of each pathway are stacked on top of each other so that biologists get a full picture of subtle and significant differences among the pathways. Layouts are determined by a global layout of the union of all pathway-representing graphs using a variant of the proven Sugiyama approach for layered graph drawing that allows edges to cross if they appear in different graphs.

Fachgebiet (DDC)

004 Informatik

Zitieren

ISO 690

BRANDES, Ulrik, Tim DWYER, Falk SCHREIBER, 2004. Visualizing Related Metabolic Pathways in Two and a Half Dimensions. In: LIOTTA, Giuseppe, ed.. Graph Drawing. Berlin, Heidelberg: Springer Berlin Heidelberg, 2004, pp. 111-122. Lecture Notes in Computer Science. 2912. ISBN 978-3-540-20831-0. Available under: doi: 10.1007/978-3-540-24595-7_10

BibTex

@inproceedings{Brandes2004Visua-5852,
  year={2004},
  doi={10.1007/978-3-540-24595-7_10},
  title={Visualizing Related Metabolic Pathways in Two and a Half Dimensions},
  number={2912},
  isbn={978-3-540-20831-0},
  publisher={Springer Berlin Heidelberg},
  address={Berlin, Heidelberg},
  series={Lecture Notes in Computer Science},
  booktitle={Graph Drawing},
  pages={111--122},
  editor={Liotta, Giuseppe},
  author={Brandes, Ulrik and Dwyer, Tim and Schreiber, Falk}
}

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