Nishiyama, Tomoaki, Sakayama, Hidetoshi, de Vries, Jan ORCID: 0000-0003-3507-5195, Buschmann, Henrik, Saint-Marcoux, Denis, Ullrich, Kristian K., Haas, Fabian B., Vanderstraeten, Lisa, Becker, Dirk ORCID: 0000-0003-0723-4160, Lang, Daniel ORCID: 0000-0002-2166-0716, Vosolsobe, Stanislav ORCID: 0000-0002-1180-3250, Rombauts, Stephane ORCID: 0000-0002-3985-4981, Wilhelmsson, Per K. I., Janitza, Philipp, Kern, Ramona, Heyl, Alexander, Ruempler, Florian, Villalobos, Luz Irina A. Calderon, Clay, John M., Skokan, Roman ORCID: 0000-0003-0467-0792, Toyoda, Atsushi, Suzuki, Yutaka, Kagoshima, Hiroshi, Schijlen, Elio, Tajeshwar, Navindra, Catarino, Bruno ORCID: 0000-0002-9546-6932, Hetherington, Alexander J., Saltykova, Assia, Bonnot, Clemence, Breuninger, Holger ORCID: 0000-0002-3193-2981, Symeonidi, Aikaterini, Radhakrishnan, Guru V., Van Nieuwerburgh, Filip ORCID: 0000-0001-8815-5485, Deforce, Dieter, Chang, Caren, Karol, Kenneth G., Hedrich, Rainer ORCID: 0000-0003-3224-1362, Ulvskov, Peter, Gloeckner, Gernot, Delwiche, Charles F., Petrasek, Jan ORCID: 0000-0002-6719-2735, Van de Peer, Yves ORCID: 0000-0003-4327-3730, Friml, Jiri ORCID: 0000-0002-8302-7596, Beilby, Mary, Dolan, Liam, Kohara, Yuji, Sugano, Sumio, Fujiyama, Asao, Delaux, Pierre-Marc ORCID: 0000-0002-6211-157X, Quint, Marcel ORCID: 0000-0003-2935-4083, Theissen, Gunter, Hagemann, Martin, Harholt, Jesper ORCID: 0000-0002-7984-0066, Dunand, Christophe ORCID: 0000-0003-1637-4042, Zachgo, Sabine, Langdale, Jane ORCID: 0000-0001-7648-3924, Maumus, Florian, Van Der Straeten, Dominique ORCID: 0000-0002-7755-1420, Gould, Sven B. and Rensing, Stefan A. (2018). The Chara Genome: Secondary Complexity and Implications for Plant Terrestrialization. Cell, 174 (2). S. 448 - 489. CAMBRIDGE: CELL PRESS. ISSN 1097-4172

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Abstract

Land plants evolved from charophytic algae, among which Charophyceae possess the most complex body plans. We present the genome of Chara braunii; comparison of the genome to those of land plants identified evolutionary novelties for plant terrestrialization and land plant heritage genes. C. braunii employs unique xylan synthases for cell wall biosynthesis, a phragmoplast (cell separation) mechanism similar to that of land plants, and many phytohormones. C. braunii plastids are controlled via landplant- like retrograde signaling, and transcriptional regulation is more elaborate than in other algae. The morphological complexity of this organism may result from expanded gene families, with three cases of particular note: genes effecting tolerance to reactive oxygen species (ROS), LysM receptor-like kinases, and transcription factors (TFs). Transcriptomic analysis of sexual reproductive structures reveals intricate control by TFs, activity of the ROS gene network, and the ancestral use of plant-like storage and stress protection proteins in the zygote.

Item Type: Journal Article
Creators:
CreatorsEmailORCIDORCID Put Code
Nishiyama, TomoakiUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Sakayama, HidetoshiUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
de Vries, JanUNSPECIFIEDorcid.org/0000-0003-3507-5195UNSPECIFIED
Buschmann, HenrikUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Saint-Marcoux, DenisUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Ullrich, Kristian K.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Haas, Fabian B.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Vanderstraeten, LisaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Becker, DirkUNSPECIFIEDorcid.org/0000-0003-0723-4160UNSPECIFIED
Lang, DanielUNSPECIFIEDorcid.org/0000-0002-2166-0716UNSPECIFIED
Vosolsobe, StanislavUNSPECIFIEDorcid.org/0000-0002-1180-3250UNSPECIFIED
Rombauts, StephaneUNSPECIFIEDorcid.org/0000-0002-3985-4981UNSPECIFIED
Wilhelmsson, Per K. I.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Janitza, PhilippUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Kern, RamonaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Heyl, AlexanderUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Ruempler, FlorianUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Villalobos, Luz Irina A. CalderonUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Clay, John M.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Skokan, RomanUNSPECIFIEDorcid.org/0000-0003-0467-0792UNSPECIFIED
Toyoda, AtsushiUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Suzuki, YutakaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Kagoshima, HiroshiUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Schijlen, ElioUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Tajeshwar, NavindraUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Catarino, BrunoUNSPECIFIEDorcid.org/0000-0002-9546-6932UNSPECIFIED
Hetherington, Alexander J.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Saltykova, AssiaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Bonnot, ClemenceUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Breuninger, HolgerUNSPECIFIEDorcid.org/0000-0002-3193-2981UNSPECIFIED
Symeonidi, AikateriniUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Radhakrishnan, Guru V.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Van Nieuwerburgh, FilipUNSPECIFIEDorcid.org/0000-0001-8815-5485UNSPECIFIED
Deforce, DieterUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Chang, CarenUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Karol, Kenneth G.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Hedrich, RainerUNSPECIFIEDorcid.org/0000-0003-3224-1362UNSPECIFIED
Ulvskov, PeterUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Gloeckner, GernotUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Delwiche, Charles F.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Petrasek, JanUNSPECIFIEDorcid.org/0000-0002-6719-2735UNSPECIFIED
Van de Peer, YvesUNSPECIFIEDorcid.org/0000-0003-4327-3730UNSPECIFIED
Friml, JiriUNSPECIFIEDorcid.org/0000-0002-8302-7596UNSPECIFIED
Beilby, MaryUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Dolan, LiamUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Kohara, YujiUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Sugano, SumioUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Fujiyama, AsaoUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Delaux, Pierre-MarcUNSPECIFIEDorcid.org/0000-0002-6211-157XUNSPECIFIED
Quint, MarcelUNSPECIFIEDorcid.org/0000-0003-2935-4083UNSPECIFIED
Theissen, GunterUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Hagemann, MartinUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Harholt, JesperUNSPECIFIEDorcid.org/0000-0002-7984-0066UNSPECIFIED
Dunand, ChristopheUNSPECIFIEDorcid.org/0000-0003-1637-4042UNSPECIFIED
Zachgo, SabineUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Langdale, JaneUNSPECIFIEDorcid.org/0000-0001-7648-3924UNSPECIFIED
Maumus, FlorianUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Van Der Straeten, DominiqueUNSPECIFIEDorcid.org/0000-0002-7755-1420UNSPECIFIED
Gould, Sven B.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Rensing, Stefan A.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
URN: urn:nbn:de:hbz:38-179766
DOI: 10.1016/j.cell.2018.06.033
Journal or Publication Title: Cell
Volume: 174
Number: 2
Page Range: S. 448 - 489
Date: 2018
Publisher: CELL PRESS
Place of Publication: CAMBRIDGE
ISSN: 1097-4172
Language: English
Faculty: Unspecified
Divisions: Unspecified
Subjects: no entry
Uncontrolled Keywords:
KeywordsLanguage
MULTIPLE SEQUENCE ALIGNMENT; TRANSCRIPTION FACTORS; EVOLUTION; CLASSIFICATION; GENES; ANNOTATION; DATABASE; REVEALS; ORIGIN; DOMAINMultiple languages
Biochemistry & Molecular Biology; Cell BiologyMultiple languages
Refereed: Yes
URI: http://kups.ub.uni-koeln.de/id/eprint/17976

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