Universität zu Köln

He, Zilong, Zhang, Huangkai, Gao, Shenghan, Lercher, Martin J., Chen, Wei-Hua and Hu, Songnian (2016). Evolview v2: an online visualization and management tool for customized and annotated phylogenetic trees. Nucleic Acids Res., 44 (W1). S. W236 - 6. OXFORD: OXFORD UNIV PRESS. ISSN 1362-4962

Full text not available from this repository.

Abstract

Evolview is an online visualization and management tool for customized and annotated phylogenetic trees. It allows users to visualize phylogenetic trees in various formats, customize the trees through built-in functions and user-supplied datasets and export the customization results to publication-ready figures. Its 'dataset system' contains not only the data to be visualized on the tree, but also 'modifiers' that control various aspects of the graphical annotation. Evolview is a single-page application (like Gmail); its carefully designed interface allows users to upload, visualize, manipulate and manage trees and datasets all in a single webpage. Developments since the last public release include a modern dataset editor with keyword highlighting functionality, seven newly added types of annotation datasets, collaboration support that allows users to share their trees and datasets and various improvements of the web interface and performance. In addition, we included eleven new 'Demo' trees to demonstrate the basic functionalities of Evolview, and five new 'Showcase' trees inspired by publications to showcase the power of Evolview in producing publication-ready figures. Evolview is freely available at: http://www.evolgenius.info/evolview/.

Item Type:	Journal Article
Creators:	Creators Email ORCID ORCID Put Code He, Zilong UNSPECIFIED UNSPECIFIED UNSPECIFIED Zhang, Huangkai UNSPECIFIED UNSPECIFIED UNSPECIFIED Gao, Shenghan UNSPECIFIED UNSPECIFIED UNSPECIFIED Lercher, Martin J. UNSPECIFIED UNSPECIFIED UNSPECIFIED Chen, Wei-Hua UNSPECIFIED UNSPECIFIED UNSPECIFIED Hu, Songnian UNSPECIFIED UNSPECIFIED UNSPECIFIED
URN:	urn:nbn:de:hbz:38-270028
DOI:	10.1093/nar/gkw370
Journal or Publication Title:	Nucleic Acids Res.
Volume:	44
Number:	W1
Page Range:	S. W236 - 6
Date:	2016
Publisher:	OXFORD UNIV PRESS
Place of Publication:	OXFORD
ISSN:	1362-4962
Language:	English
Faculty:	Unspecified
Divisions:	Unspecified
Subjects:	no entry
Uncontrolled Keywords:	Keywords Language GENE-TRANSFER; EVOLUTION; GENOME; INTEGRATION; FAMILY; LIFE; WEB Multiple languages Biochemistry & Molecular Biology Multiple languages
Refereed:	Yes
URI:	http://kups.ub.uni-koeln.de/id/eprint/27002